AuralBee: My sync issue was resolved once I turned on Global Tempo (duh!). Not sure if this will help you too. But if you didn’t have it turned on, try turning it on (from the manual):
Turning GLOBAL TEMPO ON or OFF. The factory default is OFF.
1) Press and hold the HOTKNOB button and Right Footswitch simultaneously for a few
seconds to enter System Mode.
2) Turn the Knob until [GLOBAL] is displayed.
3) Momentarily press the HOTKNOB button.
4) Turn the Knob until [TEMPO] is displayed.
5) Momentarily press the HOTKNOB button.
6) Turn the Knob to select [ON] or [OFF].
Show More...7) Press and hold the HOTKNOB button and Right Footswitch simultaneously for a few
seconds to exit System Mode.
Keep us posted!