Unfortunately, since the plugs are developed specifically for Pro Tools and the Pro Tools SDK some bugs show up in Logic and not in Pro Tools.
That being said 2 of the bugs you reported should be fixed by downloading and installing the newest version of the plug-ins found in a previous thread or our website. Doing that should fix the softkey bug, as well as the tempo issue (the problem here is that Logic doesn’t report session tempo the same way Pro Tools does, so you have to uncheck Sync to Session Tempo).
As far as the bypass issues go, that is a problem with logic that last I heard affects all TDM plug-ins. When we looked into it, there was nothing we could do.